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Laboratories' PhD project proposals 2011/2012

Candidates

To apply to the FdV PhD program, you need to choose your phD project (1 single project per candidate) and then prepare your candidature with your future supervisor in the hosting lab (and he must give you his recommendation letter).
You may find ideas of thesis subjects among the labs' proposals below or else prepare a new one with any Paris region laboratory (you may consult the list of labs that have already hosted an FdV fellow since 2007).

Then you must fill in the application form on line (sending all mandatory information and uploads) before the Monday April 23rd 2012 deadline.

Laboratories : you may submit (password = fdvlab) your phd proposal

After internal validation, it will be published below.



Optogenetic dissection of locomotion

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Date : 15/09/2010

Laboratory
Avenir/ATIP team Claire Wyart
Institut du Cerveau et de la Moelle (ICM),
Centre de recherche CNRS/INSERM
47 bld de l'Hôpital 75013 PARIS
Director : Mr Yves Agid
Main discipline : Biophysics
http://www.lps.ens.fr

PhD Supervisor
Claire Wyart
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 6 61 86 60 13

Subjects
1.: Locomotion
2.: neuronal networks
3.: Behavior

Tools-Methodologies
1.: optogenetic
2.: in vivo imaging
3.: light gated channels

 

Expectancy-related neuronal activity in the rat cerebral cortex induced by complex tactile stimuli.

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Date : 01/02/2011

Laboratory
Unité de Neurosciences, Information et Complexité CNRS UPR3293
1 avenue de la Terrasse 91190 Gif sur Yvette
Director : Yves Frégnac

PhD Supervisor
Team : Traitement sensoriel, neuromodulation et plasticité neuronale
Daniel Shulz (team leader)
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 1 69 82 34 00

Subjects / Tools-Methodologies
1 : Sensory Physiology/Electrophysiology
2 : Neuronal coding/White noise analysis
3 : Functional plasticity/Whole cell patch recordings

Website : www.unic.cnrs-gif.fr

 

Reconstitution and physical studies of a bacteria nano-pump

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Date : 27/01/2011

Laboratory
Laboratoire de Physique Statistique de l'ENS UMR CNRS 8550
Ecole Normale Superieure, 24 rue Lhomond 75005 Paris
Director : Mr Eric PEREZ
Main discipline : Biophysics
http://www.lps.ens.fr

PhD Supervisor
Wladimir URBACH
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 6 88 58 09 78

Subjects
1.: Efflux pump
2.: transmembrane proteins
3.: antibiotic resistance

Tools-Methodologies
1.: Fluorescenc recovery after pattern photobleaching
2.: Confocal microscopy
3.: recombinant protein expresion

 

Control of bacterial cell wall biosynthesis

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Date : 22/03/2011

Laboratory/
Bacterial Cytoskeleton and Bacterial Cell Morphogenesis Lab
UMR 1319 - Micalis INRA AgroParisTech
INRA Domaine de Vilvert
78352 Jouy en Josas cedex
Website : http://www.jouy.inra.fr/jouy_eng/
Main discipline : Systems Biology
Lab director : Stéphane Aimerich

PhD Supervisor
Rut CARBALLIDO LOPEZ
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 1 34.65.25.34

Subjects
1.: Bacterial cell wall, bacterial cell morphogenesis, peptidoglycan
2.: Systems Biology
3.: Genetic modules, dynamic data, global control mechanisms of complex biological functions

Tools and methodologies
1.: Transcriptomics -Tiling Array, Live Cell Array (LCA)
2.: Modeling, Mathematics, Statistics
3.: Genetics, Molecular Biology, Cell Biology, Biophysics, Microscopy

 

Multi-disciplinarity approaches for tendon repair

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Date : 17/12/2010

Laboratory
Laboratoire de Biologie du Développement (LBD)
UPMC-CNRS, UMR 7622
Campus de Jussieu 9 quai Saint Bernard,
Bâtiment C, 6ème Etage, Case 24
75252 Paris
Director : Catherine JESSUS

PhD Supervisor
Delphine DUPREZ
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 144272753

Subjects
Developmental Biology
Physico-Chemistry
stem cells

Tools-Methodologies:
cell culture
Biomechanics
surgery

 

Life stage expression regulation of Pf-int recombinase in Malaria

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Date : 10/12/2010

Laboratory
Laboratoire Immunologie Structurale
Institut Pasteur, Dept. Biologie Structurale et Chimie
25 rue du Docteur Roux 75005 Paris
Director : Mr Graham Bentley

PhD Supervisor
Deshmukh GOPAUL
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 1 45 68 85 98

Subjects
1.: Host - parasite interaction
2.: DNA recognition and Binding
3.: 3D crystal structure

Tools-Methodologies
1.: realtime quantitative PCR - Molecular biology
2.: Fluorescence microscopy - SPR- Biochemistry
3.: X-ray crystallography - Biophysics

Available funding : Region

 

Prediction of potential human P450 substrates by virtual screening and channels modeling

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Date : 03/11/2010

Laboratory

MTi UMR-S 973 (INSERM, Paris 7)
35 rue Hélène Brion, 75205 Paris Cedex 13
Director : M. Villoutreix

PhD Supervisor

Michel Petitjean
email : This e-mail address is being protected from spam bots, you need JavaScript enabled to view it
phone : +33 1 57 27 84 34

Subjects / Tools-Methodologies

1 : drug design/virtual screening
2 : structural bioinformatics/structure-based modeling
3 : P450 cytochromes/geometric modeling of channels