Listed below are PhD project descriptions of laboratories wishing to host an FdV student for the coming 2011/2012 year.
Candidates : you must choose your phD project (1 single project per candidate) and then prepare your candidature with your future supervisor in the hosting lab (and he must give you his recommendation letter).
You may find your thesis subject among the proposals below ou prepare a new one with any paris region laboratory.
Then you must deposit your on line application completed before the April 22nd 2011 deadline.
Laboratories : suggest a PhD project (password = fdvlab)
Proposals are reviewed before publication, and we wish you the best candidates possible for your project.
Among the candidatures you will receive, you will have to select the one that will receive your personal recommendation for the auditions conducted by our International Scinetific Commitee early june 2011 (1 single candidate per project).
If you already have a chosen candidate, it is no longer need to publish it and we can unpublish it if need be.
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Date : 23/4/2010
Laboratory
Evology & Evolution CNRS-UPMC-ENS UMR 7625
Ecole Normale Superieure, 24 rue Lhomond 75005 Paris
Director : Minus VAN BAALEN
PhD Supervisor
David CLAESSEN
email :
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phone : +33 144322721
Subjects / Tools-Methodologies
1 : Evolutionary dynamics/Adaptive dynamics
2 : Ecological & biogeo dynamics/Population dynamics & MIT global circulation model
3 : Phytoplankton experimental evolution/Functional genomics
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Date : 23/4/2010
Laboratory
Theoretical Modeling of Cellular Physiology
UMR 8542
Ecole Normale Supérieure
46 rue d'Ulm 75005 Paris
Director : Alain Prochiantz
PhD Supervisor
David Holcman
email :
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phone : +33 144322377
Subjects / Tools-Methodologies
1 : Neuroscience/Computationnal modelling
2 : Biophysics/Statistical physics
3 : Applied mathematics/Stochastic analysis
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Date : 23/4/2010
Laboratory
Mechanics and Genetics of Embryonic development
UMR 168, Physico-Chimie Curie
11 rue Pierre et Marie Curie 75005 Paris
Director : Jean-François Joanny
PhD Supervisor
Emmanuel Farge
email :
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phone : +33 156246760
Subjects / Tools-Methodologies
1 : Myosin-II/Myo-GFP transgenic flies
2 : Mechanical strains/Ferro-fluid magnets
3 : Modeling/Analytical and simulations
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Date : 21/04/2010
Laboratory
Laboratoire de Neurosciences Cognitives
INSERM-ENS U960
ENS 29, rue d'Ulm 75005 Paris
Director : Etienne Koechlin
PhD Supervisor
Etienne Koechlin
email :
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phone : +33 1 44 32 26 40
Subjects / Tools-Methodologies
1 : Neurosciences/fMRI
2 : Psychology/Behavioral recordings
3 : Applied mathematics/Modeling and simulation
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CJS INRA ELIGIBLE *
Date : 14/04/2010
Laboratory
Ecologie des populations et communautés INRA USC 2031
Université Pierre et Marie Curie (Paris 6)
7 quai Saint Bernard
Bât. A, 7ème étage 75252 Paris cedex 5
Director : Roger Arditi
PhD Supervisor
Thierry Spataro
email :
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phone : +33 1 44 08 86 09
Subjects / Tools-Methodologies
1 : Genetic Allee effect and extinction risk/populations dynamics models
2 : mating behavior/individual based models
3 : Evolution of life history trait/adaptive dynamics models
(*) Avaliable funding : CJS INRA ELIGIBLE
This project may be selected to be founded by a 5-year grant from INRA (Early stage scientist contract)
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CJS INRA ELIGIBLE *
Date : 14/04/2010
Laboratory
MICALIS INRA, UMR 1319
Domaine de Vilvert 78352 Jouy en Josas
Director : Stéphane Aymerich
PhD Supervisor
Maarten Van de Guchte
email :
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phone : +33 134652528
Subjects / Tools-Methodologies
1 : Construction of reference gene catalog/Bioinformatics
2 : Food - microbiota - host phenotype correlations/Statistics
3 : Metabolic pathway analysis/Biology and Bioinformatics
(*) Available funding : CJS INRA ELIGIBLE
This project may be selected to be founded by a 5-year grant from INRA (Early stage scientist contract)
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CJS INRA ELIGIBLE*
Date : 14/04/2010
Laboratory
Micalis INRA
Domaine de Vilvert, Batiment 222 78350 Jouy en Josas
Director : Stéphane Aymerich
PhD Supervisor
Marie-Agnès Petit
email :
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phone : +33 134652077
Subjects / Tools-Methodologies
1 : distant homologs of phage proteins/informatics
2 : estimation of diversity rates and rules/informatics, phylogeny
3 : in vivo analysis of new phage functions/virology, molecular biology
* CJS INRA eligible : available funding
This project may be selected to be founded by a 5-year grant from INRA (Early stage scientist contract)
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Date : 12/2/2010 + updated 14/04/2010
Laboratory
Statistique et Génome UMR CNRS 8071
523 place des Terrasses 91000 Evry
Director : Christophe Ambroise
PhD Supervisor
Catherine Matias
email :
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phone : +33 160873834
Subjects / Tools-Methodologies
1 : networks/modelling, comparison
2 : evolution/mathematical models, probability
3 : gene duplication/biological processes
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Date : 10/04/2010
Laboratory
Gènes, Synapses et Cognition URA 2182
INSTITUT PASTEUR
Unité Perception et Mémoire
25 rue du Docteur Roux
75724 PARIS Cedex 15
FRANCE
Director : Pierre-Marie LLedo
PhD Supervisor
Sheila HARROCH
email :
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phone : +33 33140613424
Subjects / Tools-Methodologies
1 : Tyrosine Phosphatases/KO mice and various constructions
2 : Myelination/lesions by cuprisone and MOG in collaboration
3 : repair/Fusion proteins constructs ready for proteins
Website : www.ura2182.cnrs-bellevue.fr
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Date : 10/4/2010
Laboratory
Laboratory of Neurophysiology and new microscopy
Inserm U603
45 rue des Saints-Pères 75006 paris
Director : Serge Charpak
PhD Supervisor
Serge Charpak
email :
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phone : +33 142864148
Subjects / Tools-Methodologies
1 : Development of a new microscope/two photon imaging, optics
2 : Neuronal network activity/imaging calcium and spikes
3 : Olfactory bulb/odor
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Date : 08/04/2010
Laboratory
Origins, Structure and Evolution of Biodiversity UMR 7205 CNRS/MNHN
Muséum National d'Histoire Naturelle CP50
45, Rue Buffon 75005 Paris
Director : Louis Deharveng
PhD Supervisor
Mathieu Joron
email :
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phone : +33 140798092
Subjects / Tools-Methodologies
1 : Evolutionary genetics/Linkage mapping, IlluminaRADtag sequencg
2 : Ecological bioinformatics/Fst genomic scans, High-throughput sequencing data
3 : Modelling/Coalescence/genealogy models, Bayesian inference
Website : www.mnhn.fr/oseb
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Date : 06/04/2010
Laboratory
Institut Cochin
INSERM U1016, CNRS UMR8104,
Université Paris Descartes
22 rue Méchain 75014 Paris
Director : Pierre-Olivier Couraud
Team
Insulin signaling, glucose sensing and glucotoxicity
PhD Supervisors
Tarik ISSAD / Anne-Françoise BURNOL
email :
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phone : +33 1 40 51 64 09
Subjects / Tools-Methodologies
1 : Insulin signaling/Protein-protein interactions - BRET methodology
2 : Structural bioinformatics/Chemoinformatics - Virtual screening
3 : Pathophysiology of insulin action/animal models of diabetes and obesity
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Date : 02/04/2010
Laboratory
UMR de Génétique Végétale INRA UMR 0320 ; CNRS UMR 8120.
Le Moulon 91190 Gif-sur-Yvette
Director : Dominique de Vienne
PhD Supervisor
Olivier Martin
email :
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phone : +33 169332336
Subjects / Tools-Methodologies
1 : Genomics/Statistics
2 : Systems Biology/Modeling
3 : Bioinformatics/Computational Science
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Date : 26/3/2010
Laboratory
Research Unit in Genomic Info INRA/ UR1164
INRA - Centre de recherches de Versailles, Route de St Cyr 78026 Versailles
Director : Hadi Quesneville
PhD Supervisor
Hadi Quesneville
email :
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phone : +33 130833110
Subjects / Tools-Methodologies
1 : Transposable elements/Bioinformatics
2 : Genomics/Statistics
3 : Evolution/Computer science
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Date : 26/3/2010
Laboratory
Multiscale dynamics in animal morphogenesis
CNRS NeD
Avenue de la Terrasse bat 33 91198 Gif sur Yvette
Director : Philippe Vernier
PhD Supervisor
Nadine Peyrieras
email :
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phone : +33 169824142
Subjects / Tools-Methodologies
1 : Morphogenesis/4D imaging
2 : Multiscale reconstruction/Image processing and analysis
3 : Biomechanics/Tensors calculation
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CJS INRA ELIGIBLE *
Date : 25/3/2010
Laboratory
IJPB, Equipe Développement et qualité des graines,
MIA Mathématiques et informatique appliquées
UMR 1318 INRA Agroparistech et unité MIA
Pôle Reproduction et Graines Bâtiment 2
INRA, Centre de Versailles-Grignon 78026 VERSAILLES Cedex
Director : David BOUCHEZ
PhD Supervisor
Bertrand DUBREUCQ
email :
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phone : +33 130833066
Subjects / Tools-Methodologies
1 : Lipid bodies imaging/confocal imaging, image processing
2 : Modeling/mathematics, informatics, computational biology
3 : model validation/mutant analysis, transgenic plants
* CJS INRA eligible : available funding
This project may be selected to be founded by a 5-year grant from INRA (Early stage scientist contract)
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Date : 18/03/10
Laboratory
Laboratoire Ecologie & Evolution UMR 7625 (UMPC/ENS/AgroParisTech/CNRS)
Université Pierre et Marie Curie,
7 quai Saint-Bernard, case 237
75252 Paris
Director : Minus van Baalen
PhD Supervisor
David Laloi (Supervisor 1)
email :
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phone : +33 33144272735
Subjects / Tools-Methodologies
1 : Evolution/Integrative ecology
2 : Mating and dispersal/Models and experiments
3 : Individual strategies/Behaviour and physiology
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Date : 11/03/10
Laboratory
Epigenomics Project / ISC-PIF CNRS UPS3201
Genopole campus 1 - Genavenir
65 rue Henri Desbruères 91030 EVRY cedex
Director : François Képès
PhD Supervisor
François KEPES
email :
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phone : +33 169474431
Subjects / Tools-Methodologies
1 : Integrative Biology/Metabolism and DNA replication
2 : Chromosome structure and evolution/Systems and Synthetic Biology
3 : Bioinformatics/Complex Systems
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Date : 09/03/2010
Laboratory
Matière et Systèmes Complexes (MSC)
UMR 7057 CNRS Paris-Diderot
Batiment Condorcet case 7056
Université Paris Diderot
10 rue Alice Domon et Léonie Duquet
75205 Paris cedex 13
Director : Loïc Auvray
PhD Supervisor
François Gallet
email :
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phone : +33 157276214
Subjects / Tools-Methodologies
1 : Cell mechanics/Optical tweezers
2 : Cell-cell and cell matrix adhesion/Micropatterning, videofluorescence
3 : Crosstalk/Molecular biology tools - expression of mutants
http://www.msc.univ-paris-diderot.fr/site/
Project partially funded by ANR
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Date : 5/03/2010
Laboratory
Molecular Biology of the gene in Extremophiles CNRS UMR8621
Institut de Génétique et Microbiologie 91405 Orsay
Director : Jean-Pierre Rousset
PhD Supervisor
Patrick Forterre
email :
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phone : +33 33169157489
Subjects / Tools-Methodologies
1 : DNA topoisomerase/Biochemistry
2 : Evolution/Molecular Biology
3 : Enzymology/Single molecule analysis
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CJS INRA ELIGIBLE *
Date : 4/3/2010
Modelling the topology of a host-parasite interaction network with statistical models for heterogeneous random graphs.
Laboratory 1
Mathématique et Informatique Appliquées
UMR 518 AgroParistech/INRA
16 rue Claude Bernard, 75005 Paris
Unit/Lab Director : Stéphane Robin
http://www.agroparistech.fr/mia/doku.php
Laboratory 2
BIOGECO, BIOdiversité, Gènes et Communautés
UMR1202 INRA/Université Bordeaux1
69 route d'Arcachon, 33612 Cestas Cedex
Unit/Lab Director : Antoine Kremer
http://www.pierroton.inra.fr/biogeco/presentation-en.html
PhD Supervisor 1
Jean-Jacques Daudin
email :
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phone : +33 1 44 08 16 67
PhD Supervisor 2
Corinne Vacher
email :
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phone : +33 5 57 12 27 24
Subjects / Tools-Methodologies
1 Identifying Modules in Graphs / Clustering and Mixture Models
2 Topology of an Ecological Network / Statistical Analysis of Complex Data Sets
3 Impact of Global Change / Metagenomic Data Analysis
* CJS INRA eligible : available funding
This project may be selected to be founded by a 5-year grant from INRA (Early stage scientist contract)
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Date : 4/3/2010
Laboratory
Neuroimaging and Psychiatry INSERM - CEA Unit 1000
SHFJ, 4 place Gl. Leclerc 91401 Orsay
Director : Jean-Luc Martinot
PhD Supervisor
Jean-Luc Martinot
email :
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phone : +33 1 69 86 77 57
Subjects / Tools-Methodologies
1 : Brain imagin / Magnetic resonance imaging
2 : Psychopathology / Neurospychology
3 : Image processing / softwares
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Date : 4/03/2010
Laboratory
Ecologie et Evolution CNRS-UPMC-UMR 7625
UPMC, Bat A, 7e etage 7 quai St Bernard 75005 Paris
Director : Minus van Baalen
PhD Supervisor
Jean-Baptiste André
email :
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phone : +33 144272694
Subjects / Tools-Methodologies
1 : Evolution/Mathematics
2 : Cooperation/Game theory
3 : Markets/microeconomics
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Date : 16/2/2010
Laboratory
Biomolecular Nanomanipulation Group
Institut Jacques Monod / CNRS UMR 7592
15 rue Hélène Brion Batiment Buffon 242B
75205 Paris Cedex 13
Director : Giuseppe Baldacci
PhD Supervisor
Terence Strick
email :
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phone : +33 157278020
Subjects / Tools-Methodologies
1 : DNA replication/magnetic trapping, single-molecule imaging
2 : DNA transcription/magnetic trapping, single-molecule imaging
3 : DNA repair/magnetic trapping, single-molecule imaging
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Date : 6/2/2010
Laboratory
Epigenomics Project CNRS UPS3201
Genopole Campus 1 - Genavenir 6
5 rue Henri Desbruères 91030 EVRY cedex
Director : François KEPES
PhD Supervisor
François KEPES
email :
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phone : +33 1 69 47 44 31
Subjects / Tools-Methodologies
1 : Integrative Biology/systems and synthetic biology
2 : Chromosome structure and evolution/molecular genetics and microbiology
3 : Functional organization of cell nucleus/nucleoid/bioinformatics
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Date : 6/2/2010
Laboratory
Mucosal entry of HIV an mucosal immunology U1016 CNRS UMR 8104
22 rue Mechain 75014 paris
Director : Miorgane Bmsel
PhD Supervisor
Morgane Bomsel
email :
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phone : +33 140516497
Subjects / Tools-Methodologies
1 : HIV/eplants/reconstruction of mucosa
2 : mucosa/confocal and live fluorescent microscopy
3 : mucosal immunity/cell biology and cellular immunology
Available funding
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Date : 02/02/2010
Laboratory
Laboratoire Ecologie, Systématique & Evolution UMR CNRS 8079
Bat 362, Université Paris Sud, 91405 Orsay
Director : Pr Paul Leadley
PhD Supervisor
Franck Courchamp
email :
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phone : +33 169155685
Subjects / Tools-Methodologies
1 : Ecology/Modelling
2 : Climate change/Lab and field experiments
3 : Biological invasions/artificial ant colonies
Website : http://www.ese.u-psud.fr/
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Date : 01/02/2010
Laboratory
IBISC
CNRS FRE 3901
523 place des terrasses de l'AGORA
91025 EVRY
Director :Jean Louis Giavitto
PhD Supervisor :
Franck Delaplace
email :
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phone : +33 160873825
Subjects / Tools-Methodologies:
1 : Complex systems / Formal methods
2 : synthetic biology / Compiler Design
3 : Unconventional languages / Biological Network Analysis
Web site : www.ibisc.univ-evry.fr
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Date : 31/10/2010
Laboratory
Molecular Plant Biology UMR 8197
Institut de Biologie de l'Ecole Normale Supérieure (IBENS)
46 rue d'Ulm
75005 Paris
Director : Antoine TRILLER
PhD Supervisor
Chris Bowler
email :
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phone : +33 1 44 32 35 25
Subjects / Tools-Methodologies
1 : Diatom biology / Functional genomics
2 : Microbial oceanography / Comparative genomics
3 : Plankton biodiversity / Tara Oceans expedition
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Date : 27/01/2010
Laboratory :
Theoretical Physics of Condensed Matter
UMR 7600 University Pierre et Marie Curie
Director : Pascal Viot
PhD Supervisor :
Julien Mozziconacci
email :
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phone : +33 144272643
Subjects / Tools-Methodologies :
1 : Chromosome Structure / Physics & 3D Graphics tools
2 : Modeling Single Molecule Experiments / Brownian Dynamics Simulation
3 : Integrating high-throughput biodata / Statistics